The Target Parameters window allows to define the parameters
The first three sections are only available for Sanger sequencing data:
- Read Calling
- defines the base and quality calling for chromatogram sequences
- Read Trimming
- defines the trimming of the read sequences according to length, qualities or ambiguous bases.
- Read Assembling
- defines the settings for the built-in assembler for first-gen sequence data.
The following three section are available for any kind of sequence data:
- Reference Sequence
- defines the settings for the reference sequence
- Target Analysis
- defines the automatically performed analysis that will be processed for each target
- View Settings
- defines some defaults for the shown GUI components of this Task Template
By default the Target Analysis panel is shown.
See a detailed description of the different parameter sections in chapter Target Parameters.